ABC2_contigs // chr13 (only within introns)

Postparser v2.3 // project Bladder

Databases: ABC2_contigs // chromosome: chr13 (only within introns)

>14454 123 252 13q13.1 chr13:32697310-32697188 BLAT!

TGTGAAGAATGACGGTGGTATTTTGATGGGGATTGCATTGAATTAGTAGATTGCTTTTGG
CAGTGTGGTCATTTTCACAATATTGATTCTACCTATCCTTGAGCATGGGATATGTTTCCA
TTT

invisible?
Gene introns: FRY (32605436 - 32870776)

>4979 122 250 13q13.1 chr13:32757330-32757451 BLAT!

TTTTCATTATTTAGTATAAAATGGTTCTATAGATTTTATGTCCTAAACATACAAATGCAA
AACAACTTAAAATACTCATGTTTGTCAACTATTACATTCTTTTGCAGGAGGTCTGAGTTA
AA

Unique to the ABC2 library
invisible?
Gene introns: FRY (32605436 - 32870776)

>19568 132 411 13q13.1 chr13:32767120-32766989 BLAT!

ATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCTATTTCCAT
TAAAAATACAAAATTAGCTGGACATGGTGGTGTGCGCCTGTAATCCCAGCTACTGGGGAG
GCTGAGGCACGA

Distance between the >6901 and >19568 ~150 bp; >6901 partly overlaps with the FRY exon
invisible?
Gene introns: FRY (32605436 - 32870776)

>31007 233 1751 13q13.1 chr13:32768099-32768331 BLAT!

ACATTTCAGTTTTCAGTTACGACATTATACTCTTGAAGAATATATGACATAAAAACCAAA
ATGAAAGCTCGGTCTTCCCTTTCATTTTACTCAGTTTATATTGACTAAGCTTTATCTGTA
TCTTTCTCTAGAACATTCTTTCATCAAATGGGAATAATATTGATTTGCTCCATGTATTCA
GGTTCATCAACTTGGCTGCGAAGTTGTTGTCTTGCTACTGGAACTTAATCCTG

Good overlapping between the libraries; partial overlapping with the FRY exon
invisible?
Gene introns: FRY (32605436 - 32870776)

>706 202 1806 13q13.1 chr13:32768133-32768306 BLAT!

AGCGTGGTCGCGGCCGAGGTACGCGGGGGAAGAATATATGACATAAAAACCAAAATGAAA
GCTCGGTCTTCCCTTTCATTTTACTCAGTTTATATTGACTAAGCTTTATCTGTATCTTTC
TCTAGAACATTCTTTCATCAAATGGGAATAATATTGATTTGCTCCATGTATTCAGGTTCA
TCAACTTGGCTGCGAAGTTGTT

Good overlapping between the two libraries, partly overlap the FRY exon
invisible?
Gene introns: FRY (32605436 - 32870776)

>3536 129 421 13q13.1 chr13:32768653-32768580 BLAT!

GGCAGTGACGTCAAGCAGCTTGCAAGTAGCAGGCACGCAAACAAAACCAGTGCGTGGTAC
TATAACAACAAATCATTTCCTGATAAAATGAGAAAAACCAATGGAACTGCAACCTTACAG
GGAGTAGTT

Distance between the >6901 and the >3536 ~400 bp, around the same FRY exon
invisible?
Gene introns: FRY (32605436 - 32870776)

Databases: ABC2_contigs // chromosome: chr13 (only within introns)

TGTGAAGAATGACGGTGGTATTTTGATGGGGATTGCATTGAATTAGTAGATTGCTTTTGG CAGTGTGGTCATTTTCACAATATTGATTCTACCTATCCTTGAGCATGGGATATGTTTCCA TTT	invisible?
Gene introns: FRY (32605436 - 32870776)

TTTTCATTATTTAGTATAAAATGGTTCTATAGATTTTATGTCCTAAACATACAAATGCAA AACAACTTAAAATACTCATGTTTGTCAACTATTACATTCTTTTGCAGGAGGTCTGAGTTA AA	Unique to the ABC2 library invisible?
Gene introns: FRY (32605436 - 32870776)

ATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCTATTTCCAT TAAAAATACAAAATTAGCTGGACATGGTGGTGTGCGCCTGTAATCCCAGCTACTGGGGAG GCTGAGGCACGA	Distance between the >6901 and >19568 ~150 bp; >6901 partly overlaps with the FRY exon invisible?
Gene introns: FRY (32605436 - 32870776)

ACATTTCAGTTTTCAGTTACGACATTATACTCTTGAAGAATATATGACATAAAAACCAAA ATGAAAGCTCGGTCTTCCCTTTCATTTTACTCAGTTTATATTGACTAAGCTTTATCTGTA TCTTTCTCTAGAACATTCTTTCATCAAATGGGAATAATATTGATTTGCTCCATGTATTCA GGTTCATCAACTTGGCTGCGAAGTTGTTGTCTTGCTACTGGAACTTAATCCTG	Good overlapping between the libraries; partial overlapping with the FRY exon invisible?
Gene introns: FRY (32605436 - 32870776)

AGCGTGGTCGCGGCCGAGGTACGCGGGGGAAGAATATATGACATAAAAACCAAAATGAAA GCTCGGTCTTCCCTTTCATTTTACTCAGTTTATATTGACTAAGCTTTATCTGTATCTTTC TCTAGAACATTCTTTCATCAAATGGGAATAATATTGATTTGCTCCATGTATTCAGGTTCA TCAACTTGGCTGCGAAGTTGTT	Good overlapping between the two libraries, partly overlap the FRY exon invisible?
Gene introns: FRY (32605436 - 32870776)

GGCAGTGACGTCAAGCAGCTTGCAAGTAGCAGGCACGCAAACAAAACCAGTGCGTGGTAC TATAACAACAAATCATTTCCTGATAAAATGAGAAAAACCAATGGAACTGCAACCTTACAG GGAGTAGTT	Distance between the >6901 and the >3536 ~400 bp, around the same FRY exon invisible?
Gene introns: FRY (32605436 - 32870776)