Postparser v2.3 // project Bladder

Databases: ABC2_contigs // chromosome: chr6 (only within introns)

>16897 186 635     6p22.3    chr6:17847358-17847543 BLAT!
ACACACACTCTAAATTCCAACAAGTCTACAGACTTTCTAGTGTGATCCCACAAGCCCCAC
CGGGAGGCATGGCCCAGCACTTGCAAATGAATCTCCACGAGGCGTGGCAATCTTTTCTTT
GAAACCTGCTCCTTCACACTCCCATTTCTGCCTCCCCATCCTGGTTTCTGAACTCATTTT
GGCATG


invisible?    
Gene introns: KIF13A (17763923 - 17987799)  

>29938 274 3167     6p21.1    chr6:42575860-42575587 BLAT!
GTAAAAAGGAGACAAAATAATGCCCATAACGGGAGTATTTGTCACAGCAAAAAACTGAAA
ACATCCTAATTGTCTATCAACAGGAGAATAAATAAATTGTGGTTTAATCATCATGAAATA
CTATACAATGTTTAAAAAATGAATGAACTACAGCAACGCTTATCAACACAGATAAACCTA
AAAACAACACTGAAATGAAAAGGCAAGCTGCAGTGTAATACATTCAATATGTATCTTGTT
ACATAATGTTTAAAGACCCCTATATAATGTTGAT


invisible?    
Gene introns: UBR2 (42531759 - 42661243)  

>24582 228 447     6p21.1    chr6:42577336-42577563 BLAT!
GTGTTGGCCAAGCACATCGGCTCACTCCTGTAATCCCAGCATTTTGGGAGGCCAAGGCAG
GCAGATTGCTTAAACCCAAGAGTTTGAGACCAGCCTAAGCAACATGGCAAAATCCCATTC
CTACAAAAAAAAAAAATAATAACAAAAATTAGCCAGGCGTGGTGGCACACACCTGCAGTC
CCAACTATTTGGGAAGCTAAGGTAAGAGGATTGCTTGAGCCCGGGAGG


invisible?    
Gene introns: UBR2 (42531759 - 42661243)  

>27136 119 260     6p21.1    chr6:42579417-42579535 BLAT!
GTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCTAACATAGTGAAACCCTGTCT
CTACTAAAAATACAACAGTTAGCCAGGCGTCGTGGCGCATGTCTGTAGTCCCAGCTCCT


invisible?    
Gene introns: UBR2 (42531759 - 42661243)  

>609 118 514     6p21.1    chr6:46004306-46004189 BLAT!
GGGAGGCCGAGGCAGGCGGAACACGAGGTCAGGAGAAGGAGACCATTCTGGCTAACATGG
TGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCTGGGCGTGGTGGCAGGCGCCT


invisible?    
Gene introns: CLIC5 (45866189 - 46048085)  

>16272 255 3425     6p21.1    chr6:46005217-46005471 BLAT!
AACCAAGTTACCTTGAAACTTGATACATGTCACTTAAACTTCCTGATTTCCTTTTGCCCC
AAGATGATGGCAATATCACCTGTCCTAATTATCTTACAGAATTATTTGGGTATGAAGTAA
GATAATATGGGTAAAATTTTTATGTGTTGGGCACCCTATTTTGAATCAGGTGTCATTTAA
TGCTGAGGACAATAATTCCAATTAAGTATCAGTAGCACTATTCATTGATAAGGAAACCAT
GAATTGGAGAAGTTA


invisible?    
Gene introns: CLIC5 (45866189 - 46048085)  

>30850 135 338     6p12.3    chr6:51559936-51559802 BLAT!
AAAGAAATATTATTAAATACTTTTAAGTCCATTTTTATTCAGCTTTGTCTACTTGCCATT
GGTTATAATAGACTTAAAACCTTAAATCTTATTCCTTTATTCTTCAATTTTTGTTTTAAA
ATTTTGGCAACATTG


invisible?    
Gene introns: PKHD1 (51480144 - 51952423)  

>7314 146 226     6p12.3    chr6:51606735-51606880 BLAT!
AAGTCCAGAAAAGTCCCACAATTAGGCATGTGCTTATTTTAACATATCAGAATGTTTTCC
CCATAGCATAAATACCTGTAATGGTGGAATAATTCTTAAAACCAATAGAAAACTTACTAT
AGAACACCATTTGAGTAGATCTAGGG


invisible?    
Gene introns: PKHD1 (51480144 - 51952423)  

>18003 125 302     6p12.3    chr6:51687154-51687030 BLAT!
AAGGAGGATGGTAATTTGGAAATTGCTTGAGAATAAACTATATCCTCTGTGCAGGCTCCC
ACTAATTAAATGCAAAATCTAATGTAACATCTCTTGCTTGTTTTATAGTTTCACACATCT
GGATT


invisible?    
Gene introns: PKHD1 (51480144 - 51952423)  

>10040 215 1306     6q12    chr6:64958149-64958363 BLAT!
GGAGGCTTGTCAGCCATCATTTAAGGCAAAGTGAAGTCATCAATGTCTCTTAAGCAGGAA
ATTAGTAATTCATGTTTATTTTCGAAACTACACTCTGGTTTTAGCATGGAGGATGGCTTG
GAAAGGAGCTGGAGGCAGTTGAAGGAGGAGGAGAATTGGACTGATACTTGAACTAAGAGA
ATGTTATGGGAATGTAAAAAAGTAAAGAGATTTAG


invisible?    
Gene introns: EYS (64429875 - 66417118)  

>23013 107 163     6q12    chr6:66064437-66064471 BLAT!
GAGAATGTCTCACCGGGGACGGTGCCTCATGCCTATAATCCCAGCACTTTGGGATTACAG
GCATGAGCCACCATGCCCGGCACCAAGTTTTTAAAGAAAGAATAATA


invisible?    
Gene introns: EYS (64429875 - 66417118)  

>17741 195 829     6q13    chr6:72774416-72774221 BLAT!
AAAAACATTTTTTTTAAACTTCATCATCATAGAAATGAAAAACAAAGTCTAGCTCTTTTA
TTTGCCAGATGAAGTCCAGTGAGGTTAAATCGCTTGATCGAGATGACGCACCCAGCTGTG
CTGGAACCACATTGTCACAGCATTGCATTCACAGCTTCCTGTCAAGTGGGCTGATCTTCT
TCCCTTTATGCATTT


invisible?    
Gene introns: RIMS1 (72596649 - 73112845)  

>2879 228 1811     6q15    chr6:90431190-90431417 BLAT!
GGTATGGAGAGTCGGCTTGACTACACTGTGTGGAGCAAGTTTTAAAGAAGCAAAGGACTC
AGAATTCATGATTGAAGAAATGCAGGCAGACCTGTTATCCTAAACTAGGGTTTTTAATGA
CCACAACAAGCAAGCATGCAGCTTACTGCTTGAAAGGGTCTTGCCTCACCCAAGCTAGAG
TGCAGTGGCCTTTGAAGCTTACTACAGCCTCAAACTTCTGGGCTCAAG


invisible?    
Gene introns: MDN1 (90353230 - 90529442)  

>1512 391 4479     6q15    chr6:90431408-90431019 BLAT!
AGAAGTTTGAGGCTGTAGTAAGCTTCAAAGGCCACTGCACTCTAGCTTGGGTGAGGCAAG
ACCCTTTCAAGCAGTAAGCTGCATGCTTGCTTGTTGTGGTCATTAAAAACCCTAGTTTAG
GATAACAGGTCTGCCTGCATTTCTTCAATCATGAATTCTGAGTCCTTTGCTTCTTTAAAA
CTTGCTCCACACAGTGTAGTCAAGCCGACTCTCCATACCTTTAAAAGGTATGACAGGAAC
TGTCTTCATGTCCTTACCCAAGCAAGTCATCCATGGATAAAAACGTTACCAGGAGCAGAA
CCATTAAGCTGGTCCAGGCAAGTTGGACTCCACCATTTCAACTTCCAGCTTTCTGTCTAA
TGCCTGTGTGCCAATGGCTTGAGTTAGGCTT


invisible?    
Gene introns: MDN1 (90353230 - 90529442)  

>23533 187 380     6q16.3    chr6:101140787-101140601 BLAT!
AAAAAAGTATTTCAAAGATGGTATTTAATAGATCATCATTATGTTGATCTTGTCATTAAA
TCTTCTAAAGCATCATCAAGTTCTCCTAGTCCAACTGCTTATTTACAGATGAGAAAACTA
AGCCTAATACTATGCCCAAAGTGAAATATGCTTATGCTTTGGAATTGAGAATAGAACCTT
GGCTTTT


invisible?    
Gene introns: ASCC3 (100956607 - 101329224)  

>20980 172 585     6q16.3    chr6:101141094-101141265 BLAT!
GTTACAGGTATTTATATAAAAGCATTTAGCCAAACCAACAAACTGAGGTGTTCAAGTTTT
GGTCTGTATAGTGAAGGTAGTATGAATTGTGAGAATCTCCATATGCAAGGAGTCCACAAT
CACTGAGAAAAAATAACAAAACTGAGGGTGGAAAGGCTGTGGGAAAAAAAAA


invisible?    
Gene introns: ASCC3 (100956607 - 101329224)  

>5127 158 1875     6q16.3    chr6:101141687-101141530 BLAT!
AAAAAAATTTTTAAACTGCTTCCTTACAGCATTAGTTTCTCATAATTTACATAAAGATTA
ATAATTTCTGTTCTGTGGTGACACTTAGTAGACATATTTCACATATGGAGTATCTATTTC
ATTTTTGTTACAGAAATGGAATTTGGTCATCTACTTTG


invisible?    
Gene introns: ASCC3 (100956607 - 101329224)  

>406 195 2181     6q16.3    chr6:101141738-101141544 BLAT!
AATATATTGAGCTGCTACAAGAGTTTGTTGTAAGAACAAATTCCACAGCTAAAAAAAATT
TTTAAACTGCTTCCTTACAGCATTAGTTTCTCATAATTTACATAAAGATTAATAATTTCT
GTTCTGTGGTGACACTTAGTAGACATATTTCACATATGGAGTATCTATTTCATTTTTGTT
ACAGAAATGGAATTT


invisible?    
Gene introns: ASCC3 (100956607 - 101329224)  

>4072 116 179     6q16.3    chr6:101141943-101142058 BLAT!
AATTATATTTGCTCTTGGATAAAAGTTTGAAAATTCTAAAATCTCATCATCCCTTTCATT
TTCCTGAATAATATTTTTGGGAAAAAAATTGGTAAAAATTTCTATTTAAAAATAAA


invisible?    
Gene introns: ASCC3 (100956607 - 101329224)  

>16828 206 874     6q21    chr6:114241746-114241541 BLAT!
ATAATGTAAATGACAAGCATACTTACCACATACTTACCTCTGGATACACACTCAGTGGAT
CTGAGGTTCAGAAGAGTGAGGCTGGGGACCAACAGGTAAACATCTTTTCAATCAAAATGA
CAAAGGTCTGAGTCAAGGAGCAGGATCAGATTTGATATTGAAATATTTGTTGACAGATGA
AATACAGAAAGTTGTAGATGTTAGTG


invisible?    
Gene introns: FLJ34503 (114225550 - 114242806)  

>5258 230 920     6q24.3    chr6:146692804-146693033 BLAT!
TCAATTGATTTGATTTTTAGATCCCGCAGATAAGTGGGAATATGTGATGCTTGTGTTTCT
GTGCCTGGCTTATTTTACTTAACATAATAATCTCAAGTTCCATCCATGTTGTTGCAAATG
ACTGGATCTCATTCTTTTTTATGGCTGTATAATACTCCATTGTGTATATGCATTACCTTT
TCTTTAAATTCACCTGTTGATGAACATTTAGGTTGCTTCCAAATCTTAGC


invisible?    
Gene introns: GRM1 (146348781 - 146758731)  

>1674 167 668     6q24.3    chr6:146692950-146692826 BLAT!
TGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTATTCAGCCATAAAAAAGAATG
AGATCCAGTCATTTGCAACAACATGGATGGAACTTGAGATTATTATGTTAAGTAAAATAA
GCCAGGCACAGAAACACAAGCATCACATATTCCCACTTATCTGCGGG


invisible?    
Gene introns: GRM1 (146348781 - 146758731)  

>21416 129 186     6q25.2    chr6:152777181-152777072 BLAT!
CTTTTTAAACAAAAACATCAGGAACTGTTAGCTTGTCAAGAAAACTGTAAGAAAACCTTG
ACACTTATTGAGAAAGGCAGTCAAAGTGTTCAAAAGTTTGTGACCTTGAGCAACGTGTTA
AAGCATTTT


invisible?    
Gene introns: SYNE1 (152442821 - 152957986)  

>11497 419 5022     6q25.3    chr6:159187186-159186764 BLAT!
GAATAAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAG
GAGGGCAGTGGTGGAGCTGGACCTGCCTGCTGCAGTCACGTGTAAACAGGATTATTATTA
GTGTTTTATGCATGTAATGGACTATGCACACTTTTAATTTTGTCAGATTCACACATGCCA
CTATGAGCTTTCAGACTCCAGCTGTGAAGAGACTCTGTTTGCTTGTGTTTGTTTGCAGTC
TCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGAGGCCGTTGGTTCCG
CCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGT
GGATTCCATGCCGCAGACATGAAATAAAAGCTTTGCAAAGGCACGAAGCAGCACGGGTG


invisible?    
Gene introns: EZR (159186772 - 159239340)  

Databases: ABC2_contigs // chromosome: chr6 (only within introns)